Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
APOEP02649 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APOEP02649 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOEP02649 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APOEP02649 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.81■□□□□ 0.44
APOEP02649 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.81■□□□□ 0.44
APOEP02649 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOEP02649 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.81■□□□□ 0.44
APOEP02649 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.81■□□□□ 0.44
APOEP02649 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.81■□□□□ 0.44
APOEP02649 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.81■□□□□ 0.44
APOEP02649 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.81■□□□□ 0.44
APOEP02649 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.81■□□□□ 0.44
APOEP02649 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
APOEP02649 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOEP02649 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.81■□□□□ 0.44
APOEP02649 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOEP02649 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.81■□□□□ 0.44
APOEP02649 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
APOEP02649 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOEP02649 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.8■□□□□ 0.44
APOEP02649 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.8■□□□□ 0.44
APOEP02649 AC124067.4-201ENST00000519691 2379 ntBASIC17.8■□□□□ 0.44
APOEP02649 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.8■□□□□ 0.44
APOEP02649 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
APOEP02649 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
APOEP02649 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
APOEP02649 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.8■□□□□ 0.44
APOEP02649 AC009947.1-201ENST00000444350 727 ntBASIC17.8■□□□□ 0.44
APOEP02649 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 AC108073.2-201ENST00000464002 357 ntBASIC17.8■□□□□ 0.44
APOEP02649 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.8■□□□□ 0.44
APOEP02649 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.8■□□□□ 0.44
APOEP02649 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.8■□□□□ 0.44
APOEP02649 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 TERC-201ENST00000602385 541 ntBASIC17.8■□□□□ 0.44
APOEP02649 AF228730.7-201ENST00000641842 219 ntBASIC17.8■□□□□ 0.44
APOEP02649 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.8■□□□□ 0.44
APOEP02649 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
APOEP02649 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.8■□□□□ 0.44
APOEP02649 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
APOEP02649 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.8■□□□□ 0.44
APOEP02649 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APOEP02649 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
APOEP02649 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.79■□□□□ 0.44
APOEP02649 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.79■□□□□ 0.44
APOEP02649 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.79■□□□□ 0.44
APOEP02649 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.79■□□□□ 0.44
APOEP02649 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
APOEP02649 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
APOEP02649 AC106730.1-201ENST00000566722 1090 ntBASIC17.79■□□□□ 0.44
APOEP02649 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.79■□□□□ 0.44
APOEP02649 MIR4751-201ENST00000578027 74 ntBASIC17.79■□□□□ 0.44
APOEP02649 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.79■□□□□ 0.44
APOEP02649 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
APOEP02649 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.79■□□□□ 0.44
APOEP02649 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.79■□□□□ 0.44
APOEP02649 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.79■□□□□ 0.44
APOEP02649 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APOEP02649 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
APOEP02649 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.78■□□□□ 0.44
APOEP02649 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOEP02649 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOEP02649 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APOEP02649 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
APOEP02649 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOEP02649 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOEP02649 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOEP02649 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.78■□□□□ 0.44
APOEP02649 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
APOEP02649 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APOEP02649 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APOEP02649 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms