Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.86■□□□□ 0.61
CLSTN1O94985 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.86■□□□□ 0.61
CLSTN1O94985 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.86■□□□□ 0.61
CLSTN1O94985 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.86■□□□□ 0.61
CLSTN1O94985 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.86■□□□□ 0.61
CLSTN1O94985 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.86■□□□□ 0.61
CLSTN1O94985 MTDHP3-201ENST00000594186 672 ntBASIC18.86■□□□□ 0.61
CLSTN1O94985 AP001269.4-201ENST00000609611 512 ntBASIC18.86■□□□□ 0.61
CLSTN1O94985 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLSTN1O94985 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.86■□□□□ 0.61
CLSTN1O94985 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.86■□□□□ 0.61
CLSTN1O94985 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.86■□□□□ 0.61
CLSTN1O94985 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 LYSMD4-203ENST00000378904 2122 ntBASIC18.86■□□□□ 0.61
CLSTN1O94985 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CLSTN1O94985 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.85■□□□□ 0.61
CLSTN1O94985 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLSTN1O94985 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CLSTN1O94985 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLSTN1O94985 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CLSTN1O94985 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.85■□□□□ 0.61
CLSTN1O94985 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
CLSTN1O94985 AC004870.1-201ENST00000315132 882 ntBASIC18.85■□□□□ 0.61
CLSTN1O94985 AC003669.1-201ENST00000334569 611 ntBASIC18.85■□□□□ 0.61
CLSTN1O94985 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.85■□□□□ 0.61
CLSTN1O94985 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.85■□□□□ 0.61
CLSTN1O94985 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.85■□□□□ 0.61
CLSTN1O94985 ABCD1P5-201ENST00000445663 754 ntBASIC18.85■□□□□ 0.61
CLSTN1O94985 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.85■□□□□ 0.61
CLSTN1O94985 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.85■□□□□ 0.61
CLSTN1O94985 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.85■□□□□ 0.61
CLSTN1O94985 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.85■□□□□ 0.61
CLSTN1O94985 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.85■□□□□ 0.61
CLSTN1O94985 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.85■□□□□ 0.61
CLSTN1O94985 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.85■□□□□ 0.61
CLSTN1O94985 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.85■□□□□ 0.61
CLSTN1O94985 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLSTN1O94985 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLSTN1O94985 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 AC046185.3-201ENST00000623228 1824 ntBASIC18.84■□□□□ 0.61
CLSTN1O94985 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.84■□□□□ 0.61
CLSTN1O94985 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.84■□□□□ 0.61
CLSTN1O94985 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 SAPCD2P3-201ENST00000455031 850 ntBASIC18.84■□□□□ 0.61
CLSTN1O94985 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 KRT126P-201ENST00000549467 1181 ntBASIC18.84■□□□□ 0.61
CLSTN1O94985 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.84■□□□□ 0.61
CLSTN1O94985 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.84■□□□□ 0.61
CLSTN1O94985 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 AL049757.1-201ENST00000616842 1596 ntBASIC18.84■□□□□ 0.61
CLSTN1O94985 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.84■□□□□ 0.61
CLSTN1O94985 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLSTN1O94985 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.84■□□□□ 0.61
CLSTN1O94985 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLSTN1O94985 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLSTN1O94985 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLSTN1O94985 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLSTN1O94985 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
CLSTN1O94985 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLSTN1O94985 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLSTN1O94985 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms