Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.06■□□□□ 0.32
RFPL1O75677 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.06■□□□□ 0.32
RFPL1O75677 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.06■□□□□ 0.32
RFPL1O75677 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFPL1O75677 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.06■□□□□ 0.32
RFPL1O75677 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
RFPL1O75677 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RFPL1O75677 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RFPL1O75677 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.06■□□□□ 0.32
RFPL1O75677 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 NSUN5P1-202ENST00000421140 1535 ntBASIC17.06■□□□□ 0.32
RFPL1O75677 NSUN5P2-203ENST00000457352 1529 ntBASIC17.06■□□□□ 0.32
RFPL1O75677 ALOX12P2-203ENST00000570921 1945 ntBASIC17.06■□□□□ 0.32
RFPL1O75677 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.05■□□□□ 0.32
RFPL1O75677 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.05■□□□□ 0.32
RFPL1O75677 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RFPL1O75677 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.05■□□□□ 0.32
RFPL1O75677 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.05■□□□□ 0.32
RFPL1O75677 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.05■□□□□ 0.32
RFPL1O75677 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RFPL1O75677 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RFPL1O75677 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.05■□□□□ 0.32
RFPL1O75677 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RFPL1O75677 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.05■□□□□ 0.32
RFPL1O75677 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.05■□□□□ 0.32
RFPL1O75677 AC009533.2-201ENST00000543664 586 ntBASIC17.05■□□□□ 0.32
RFPL1O75677 DUX4L17-201ENST00000557360 1267 ntBASIC17.05■□□□□ 0.32
RFPL1O75677 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.05■□□□□ 0.32
RFPL1O75677 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.05■□□□□ 0.32
RFPL1O75677 AC011467.2-201ENST00000598425 242 ntBASIC17.05■□□□□ 0.32
RFPL1O75677 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
RFPL1O75677 BX640515.1-201ENST00000617215 977 ntBASIC17.05■□□□□ 0.32
RFPL1O75677 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.05■□□□□ 0.32
RFPL1O75677 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RFPL1O75677 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFPL1O75677 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RFPL1O75677 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.04■□□□□ 0.32
RFPL1O75677 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 TUBB8P12-201ENST00000308911 1335 ntBASIC17.04■□□□□ 0.32
RFPL1O75677 TUBB7P-202ENST00000428444 1305 ntBASIC17.04■□□□□ 0.32
RFPL1O75677 TUBB8P7-204ENST00000567960 1332 ntBASIC17.04■□□□□ 0.32
RFPL1O75677 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.04■□□□□ 0.32
RFPL1O75677 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 AKR1C7P-201ENST00000305623 895 ntBASIC17.04■□□□□ 0.32
RFPL1O75677 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RFPL1O75677 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.04■□□□□ 0.32
RFPL1O75677 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RFPL1O75677 KLF4P1-201ENST00000412782 1185 ntBASIC17.04■□□□□ 0.32
RFPL1O75677 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.04■□□□□ 0.32
RFPL1O75677 MINOS1P3-201ENST00000457048 203 ntBASIC17.04■□□□□ 0.32
RFPL1O75677 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RFPL1O75677 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.04■□□□□ 0.32
RFPL1O75677 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.04■□□□□ 0.32
RFPL1O75677 AP002490.2-201ENST00000524791 560 ntBASIC17.04■□□□□ 0.32
RFPL1O75677 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.04■□□□□ 0.32
RFPL1O75677 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.04■□□□□ 0.32
RFPL1O75677 REXO1L6P-202ENST00000619970 1078 ntBASIC17.04■□□□□ 0.32
RFPL1O75677 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.04■□□□□ 0.32
RFPL1O75677 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms