Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.1■□□□□ 0.01
GMDSO60547 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GMDSO60547 AC092171.3-201ENST00000610122 2651 ntBASIC15.1■□□□□ 0.01
GMDSO60547 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GMDSO60547 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GMDSO60547 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
GMDSO60547 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.1■□□□□ 0.01
GMDSO60547 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GMDSO60547 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GMDSO60547 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.1■□□□□ 0.01
GMDSO60547 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GMDSO60547 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GMDSO60547 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
GMDSO60547 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GMDSO60547 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
GMDSO60547 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
GMDSO60547 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GMDSO60547 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GMDSO60547 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
GMDSO60547 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GMDSO60547 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.09■□□□□ 0.01
GMDSO60547 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GMDSO60547 AL662844.4-201ENST00000606367 2838 ntBASIC15.09■□□□□ 0.01
GMDSO60547 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GMDSO60547 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GMDSO60547 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GMDSO60547 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
GMDSO60547 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.09■□□□□ 0.01
GMDSO60547 UPK3BP1-201ENST00000428678 509 ntBASIC15.09■□□□□ 0.01
GMDSO60547 AC007967.3-201ENST00000434308 558 ntBASIC15.09■□□□□ 0.01
GMDSO60547 LINC00265-3P-201ENST00000447588 903 ntBASIC15.09■□□□□ 0.01
GMDSO60547 KRT17P6-201ENST00000453795 1220 ntBASIC15.09■□□□□ 0.01
GMDSO60547 MINOS1P3-201ENST00000457048 203 ntBASIC15.09■□□□□ 0.01
GMDSO60547 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
GMDSO60547 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.09■□□□□ 0.01
GMDSO60547 AC122714.2-201ENST00000502787 707 ntBASIC15.09■□□□□ 0.01
GMDSO60547 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.09■□□□□ 0.01
GMDSO60547 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.09■□□□□ 0.01
GMDSO60547 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.09■□□□□ 0.01
GMDSO60547 AC092329.2-201ENST00000598402 547 ntBASIC15.09■□□□□ 0.01
GMDSO60547 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.09■□□□□ 0.01
GMDSO60547 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
GMDSO60547 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.09■□□□□ 0.01
GMDSO60547 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.09■□□□□ 0.01
GMDSO60547 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
GMDSO60547 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GMDSO60547 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GMDSO60547 TCAF2P1-201ENST00000291129 2421 ntBASIC15.08■□□□□ 0.01
GMDSO60547 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GMDSO60547 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GMDSO60547 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
GMDSO60547 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
GMDSO60547 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
GMDSO60547 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.08■□□□□ 0
GMDSO60547 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GMDSO60547 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.08■□□□□ 0
GMDSO60547 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GMDSO60547 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.08■□□□□ 0
GMDSO60547 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
GMDSO60547 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GMDSO60547 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
GMDSO60547 FAM220CP-201ENST00000395253 831 ntBASIC15.08■□□□□ 0
GMDSO60547 AC103564.2-201ENST00000432853 1299 ntBASIC15.08■□□□□ 0
GMDSO60547 AC104819.1-201ENST00000504587 486 ntBASIC15.08■□□□□ 0
GMDSO60547 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.08■□□□□ 0
GMDSO60547 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.08■□□□□ 0
GMDSO60547 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.08■□□□□ 0
GMDSO60547 AC012615.1-201ENST00000565797 1299 ntBASIC15.08■□□□□ 0
GMDSO60547 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.08■□□□□ 0
GMDSO60547 MIR3180-1-201ENST00000580374 94 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms