Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SRGAP3O43295 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SRGAP3O43295 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
SRGAP3O43295 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.01■□□□□ 0.95
SRGAP3O43295 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.01■□□□□ 0.95
SRGAP3O43295 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.01■□□□□ 0.95
SRGAP3O43295 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.01■□□□□ 0.95
SRGAP3O43295 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.01■□□□□ 0.95
SRGAP3O43295 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SRGAP3O43295 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.01■□□□□ 0.95
SRGAP3O43295 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 PDPK2P-202ENST00000562415 1191 ntBASIC21.01■□□□□ 0.95
SRGAP3O43295 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.01■□□□□ 0.95
SRGAP3O43295 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.01■□□□□ 0.95
SRGAP3O43295 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.01■□□□□ 0.95
SRGAP3O43295 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SRGAP3O43295 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SRGAP3O43295 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SRGAP3O43295 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP3O43295 AC131009.4-201ENST00000624048 1740 ntBASIC21.01■□□□□ 0.95
SRGAP3O43295 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SRGAP3O43295 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21■□□□□ 0.95
SRGAP3O43295 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 AL645728.1-201ENST00000366221 2101 ntBASIC21■□□□□ 0.95
SRGAP3O43295 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SRGAP3O43295 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SRGAP3O43295 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21■□□□□ 0.95
SRGAP3O43295 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21■□□□□ 0.95
SRGAP3O43295 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21■□□□□ 0.95
SRGAP3O43295 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21■□□□□ 0.95
SRGAP3O43295 AC002347.1-201ENST00000569543 541 ntBASIC21■□□□□ 0.95
SRGAP3O43295 MIR4515-201ENST00000584082 81 ntBASIC21■□□□□ 0.95
SRGAP3O43295 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21■□□□□ 0.95
SRGAP3O43295 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21■□□□□ 0.95
SRGAP3O43295 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP3O43295 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21■□□□□ 0.95
SRGAP3O43295 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21■□□□□ 0.95
SRGAP3O43295 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SRGAP3O43295 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SRGAP3O43295 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.99■□□□□ 0.95
SRGAP3O43295 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
SRGAP3O43295 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SRGAP3O43295 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SRGAP3O43295 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SRGAP3O43295 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SRGAP3O43295 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.99■□□□□ 0.95
SRGAP3O43295 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.99■□□□□ 0.95
SRGAP3O43295 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.99■□□□□ 0.95
SRGAP3O43295 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.99■□□□□ 0.95
SRGAP3O43295 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.99■□□□□ 0.95
SRGAP3O43295 MIR4492-201ENST00000581627 80 ntBASIC20.99■□□□□ 0.95
SRGAP3O43295 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.99■□□□□ 0.95
SRGAP3O43295 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.99■□□□□ 0.95
SRGAP3O43295 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SRGAP3O43295 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SRGAP3O43295 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.99■□□□□ 0.95
SRGAP3O43295 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
SRGAP3O43295 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP3O43295 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SRGAP3O43295 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRGAP3O43295 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms