Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC008687.5-201ENST00000593746 558 ntBASIC16.24■□□□□ 0.19
PDLIM1O00151 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.24■□□□□ 0.19
PDLIM1O00151 AC083849.1-201ENST00000615227 514 ntBASIC16.24■□□□□ 0.19
PDLIM1O00151 AC079602.3-201ENST00000623931 403 ntBASIC16.24■□□□□ 0.19
PDLIM1O00151 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.24■□□□□ 0.19
PDLIM1O00151 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDLIM1O00151 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM1O00151 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM1O00151 AC144831.1-201ENST00000573312 2656 ntBASIC16.24■□□□□ 0.19
PDLIM1O00151 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM1O00151 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM1O00151 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM1O00151 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM1O00151 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.24■□□□□ 0.19
PDLIM1O00151 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM1O00151 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.24■□□□□ 0.19
PDLIM1O00151 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM1O00151 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PDLIM1O00151 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
PDLIM1O00151 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.23■□□□□ 0.19
PDLIM1O00151 HLA-F-220ENST00000434407 884 ntBASIC16.23■□□□□ 0.19
PDLIM1O00151 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.23■□□□□ 0.19
PDLIM1O00151 AC092597.1-201ENST00000487352 616 ntBASIC16.23■□□□□ 0.19
PDLIM1O00151 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.23■□□□□ 0.19
PDLIM1O00151 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.23■□□□□ 0.19
PDLIM1O00151 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.23■□□□□ 0.19
PDLIM1O00151 AL139327.4-201ENST00000612362 153 ntBASIC16.23■□□□□ 0.19
PDLIM1O00151 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDLIM1O00151 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.23■□□□□ 0.19
PDLIM1O00151 AC006058.4-201ENST00000624016 1670 ntBASIC16.23■□□□□ 0.19
PDLIM1O00151 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.23■□□□□ 0.19
PDLIM1O00151 BX276092.7-203ENST00000637198 1536 ntBASIC16.23■□□□□ 0.19
PDLIM1O00151 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PDLIM1O00151 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM1O00151 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.23■□□□□ 0.19
PDLIM1O00151 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.23■□□□□ 0.19
PDLIM1O00151 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.23■□□□□ 0.19
PDLIM1O00151 AL137784.3-201ENST00000623858 2288 ntBASIC16.22■□□□□ 0.19
PDLIM1O00151 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PDLIM1O00151 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM1O00151 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM1O00151 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM1O00151 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM1O00151 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PDLIM1O00151 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PDLIM1O00151 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM1O00151 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PDLIM1O00151 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 ARMC10P1-201ENST00000313754 855 ntBASIC16.22■□□□□ 0.19
PDLIM1O00151 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM1O00151 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.22■□□□□ 0.19
PDLIM1O00151 SPDYE13P-201ENST00000445314 798 ntBASIC16.22■□□□□ 0.19
PDLIM1O00151 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.22■□□□□ 0.19
PDLIM1O00151 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.22■□□□□ 0.19
PDLIM1O00151 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.22■□□□□ 0.19
PDLIM1O00151 AC087388.1-201ENST00000571370 1112 ntBASIC16.22■□□□□ 0.19
PDLIM1O00151 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.22■□□□□ 0.19
PDLIM1O00151 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.22■□□□□ 0.19
PDLIM1O00151 AL121956.5-201ENST00000625261 221 ntBASIC16.22■□□□□ 0.19
PDLIM1O00151 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.22■□□□□ 0.19
PDLIM1O00151 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.22■□□□□ 0.19
PDLIM1O00151 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PDLIM1O00151 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PDLIM1O00151 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PDLIM1O00151 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PDLIM1O00151 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PDLIM1O00151 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PDLIM1O00151 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM1O00151 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms