Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 AC136632.2-201ENST00000512891 861 ntBASIC16.98■□□□□ 0.31
CFAP99D6REC4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 AP001005.1-201ENST00000571755 1248 ntBASIC16.98■□□□□ 0.31
CFAP99D6REC4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 AL121894.2-201ENST00000602977 491 ntBASIC16.98■□□□□ 0.31
CFAP99D6REC4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 FAM215A-202ENST00000632077 792 ntBASIC16.98■□□□□ 0.31
CFAP99D6REC4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 CICP6-201ENST00000457191 2729 ntBASIC16.98■□□□□ 0.31
CFAP99D6REC4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 HNRNPDP1-201ENST00000439535 754 ntBASIC16.97■□□□□ 0.31
CFAP99D6REC4 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 AC124947.2-201ENST00000547118 1133 ntBASIC16.97■□□□□ 0.31
CFAP99D6REC4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 AC148477.8-201ENST00000624298 468 ntBASIC16.97■□□□□ 0.31
CFAP99D6REC4 AC005593.1-201ENST00000624894 515 ntBASIC16.97■□□□□ 0.31
CFAP99D6REC4 AL805961.1-202ENST00000641562 540 ntBASIC16.97■□□□□ 0.31
CFAP99D6REC4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP99D6REC4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CFAP99D6REC4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 NKILA-202ENST00000614771 2598 ntBASIC16.96■□□□□ 0.31
CFAP99D6REC4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 AP002414.1-201ENST00000391405 1147 ntBASIC16.96■□□□□ 0.31
CFAP99D6REC4 MRPL3P1-201ENST00000400109 1033 ntBASIC16.96■□□□□ 0.31
CFAP99D6REC4 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 KRT18P27-201ENST00000427733 1299 ntBASIC16.96■□□□□ 0.31
CFAP99D6REC4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 SLC25A6P4-201ENST00000586535 553 ntBASIC16.96■□□□□ 0.31
CFAP99D6REC4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CFAP99D6REC4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP99D6REC4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms