Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 MIR4492-201ENST00000581627 80 ntBASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 KRT18P55-202ENST00000578578 1546 ntBASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 AC073439.1-201ENST00000624121 1774 ntBASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 SLC25A24P2-201ENST00000415059 510 ntBASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 ZNF767P-206ENST00000513792 565 ntBASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 CYP2A7P1-201ENST00000595391 815 ntBASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 RPSAP52-203ENST00000622976 1023 ntBASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM88BA6NKF7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 CLK3P2-201ENST00000427566 1453 ntBASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 KRT8P13-201ENST00000463294 1010 ntBASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 AC104596.2-201ENST00000512793 793 ntBASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88BA6NKF7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms