Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 AC125634.1-201ENST00000438758 1403 ntBASIC14.83□□□□□ -0.04
SHISA3A0PJX4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 AL596275.1-201ENST00000423464 877 ntBASIC14.82□□□□□ -0.04
SHISA3A0PJX4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 ZNF444P1-201ENST00000559497 298 ntBASIC14.82□□□□□ -0.04
SHISA3A0PJX4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHISA3A0PJX4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 SNORA78-201ENST00000459373 127 ntBASIC14.81□□□□□ -0.04
SHISA3A0PJX4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 TNRC18P2-201ENST00000417666 2714 ntBASIC14.81□□□□□ -0.04
SHISA3A0PJX4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHISA3A0PJX4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 AC132938.5-201ENST00000624980 1813 ntBASIC14.8□□□□□ -0.04
SHISA3A0PJX4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms