Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LINC02012-201ENST00000608206 1725 ntBASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PMS2P7-201ENST00000506558 1336 ntBASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC098831.1-202ENST00000438821 336 ntBASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC104109.2-201ENST00000602919 1418 ntBASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FER1L4-210ENST00000615531 5998 ntBASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AL020989.1-201ENST00000422979 469 ntBASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AL671883.3-201ENST00000603274 991 ntBASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms