Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 AL022326.1-202ENST00000641533 845 ntBASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA11Q9Y5H2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA11Q9Y5H2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA11Q9Y5H2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PCDHGA11Q9Y5H2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA11Q9Y5H2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA11Q9Y5H2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA11Q9Y5H2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 MTDHP3-201ENST00000594186 672 ntBASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 AC005915.1-201ENST00000624912 2018 ntBASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA11Q9Y5H2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 NKAPP1-205ENST00000585790 367 ntBASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 AL355877.3-201ENST00000622820 899 ntBASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 NCF1C-201ENST00000438382 1427 ntBASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA11Q9Y5H2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA11Q9Y5H2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms