Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDP1Q9Y5B0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CTDP1Q9Y5B0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CTDP1Q9Y5B0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CTDP1Q9Y5B0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDP1Q9Y5B0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTDP1Q9Y5B0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDP1Q9Y5B0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTDP1Q9Y5B0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.6■□□□□ 0.73
CTDP1Q9Y5B0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 EGFEM1P-202ENST00000431685 1563 ntBASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDP1Q9Y5B0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 AL121761.2-201ENST00000598007 1648 ntBASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTDP1Q9Y5B0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 AC005237.2-201ENST00000434368 219 ntBASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 CYMP-203ENST00000474680 1263 ntBASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 AC022145.2-201ENST00000598203 171 ntBASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 AC093028.1-201ENST00000622998 982 ntBASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTDP1Q9Y5B0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 AC093525.9-201ENST00000624961 1746 ntBASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 AL353732.1-201ENST00000569618 1459 ntBASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms