Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 AL121761.2-201ENST00000598007 1648 ntBASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 TSEN15P1-201ENST00000423257 515 ntBASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 AL513210.1-201ENST00000629608 234 ntBASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX2IPQ9Y2D8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 AC002056.1-201ENST00000395613 760 ntBASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 AC105339.1-204ENST00000636249 355 ntBASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 AC138028.4-201ENST00000564984 1845 ntBASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX2IPQ9Y2D8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.27■□□□□ 0.51
SSX2IPQ9Y2D8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.27■□□□□ 0.51
SSX2IPQ9Y2D8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SSX2IPQ9Y2D8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SSX2IPQ9Y2D8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SSX2IPQ9Y2D8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SSX2IPQ9Y2D8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 AC027612.4-201ENST00000605371 583 ntBASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 AL645728.2-201ENST00000641974 660 ntBASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SSX2IPQ9Y2D8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms