Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC148477.8-201ENST00000624298 468 ntBASIC16.07■□□□□ 0.16
RNF6Q9Y252 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RNF6Q9Y252 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RNF6Q9Y252 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF6Q9Y252 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RNF6Q9Y252 AC046185.3-201ENST00000623228 1824 ntBASIC16.07■□□□□ 0.16
RNF6Q9Y252 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF6Q9Y252 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RNF6Q9Y252 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF6Q9Y252 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF6Q9Y252 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 MIR574-201ENST00000385209 96 ntBASIC16.06■□□□□ 0.16
RNF6Q9Y252 RCN1P2-201ENST00000398357 915 ntBASIC16.06■□□□□ 0.16
RNF6Q9Y252 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 AC005336.2-201ENST00000593183 939 ntBASIC16.06■□□□□ 0.16
RNF6Q9Y252 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 AC117500.6-201ENST00000624871 588 ntBASIC16.06■□□□□ 0.16
RNF6Q9Y252 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF6Q9Y252 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF6Q9Y252 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 TP73-AS1-210ENST00000637775 1455 ntBASIC16.05■□□□□ 0.16
RNF6Q9Y252 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 KRT8P47-201ENST00000604727 1398 ntBASIC16.05■□□□□ 0.16
RNF6Q9Y252 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 AC068472.1-201ENST00000474589 881 ntBASIC16.05■□□□□ 0.16
RNF6Q9Y252 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 SLC25A1P1-201ENST00000528351 927 ntBASIC16.05■□□□□ 0.16
RNF6Q9Y252 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF6Q9Y252 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF6Q9Y252 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms