Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 RARRES2P8-201ENST00000566335 367 ntBASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRIT1Q9P2V4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 HCG4-201ENST00000418983 998 ntBASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 DUX4L17-201ENST00000557360 1267 ntBASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 AC093520.2-201ENST00000561830 333 ntBASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 AL135744.1-201ENST00000565098 629 ntBASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 AL009183.1-201ENST00000603760 355 ntBASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 AKAP8P1-201ENST00000434743 1349 ntBASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 TOP3BP1-201ENST00000420768 1380 ntBASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.37■□□□□ 0.21
LRIT1Q9P2V4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 AL138688.1-201ENST00000624851 1594 ntBASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 AC243562.1-201ENST00000560672 389 ntBASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 LINC02084-201ENST00000606069 1096 ntBASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 AC009093.7-201ENST00000623853 1223 ntBASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRIT1Q9P2V4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms