Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 AC078925.2-201ENST00000624013 1973 ntBASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LIN7CQ9NUP9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 AC007967.3-201ENST00000434308 558 ntBASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 AP002490.2-201ENST00000524791 560 ntBASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 AC009533.2-201ENST00000543664 586 ntBASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.17□□□□□ -0.14
LIN7CQ9NUP9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 AC125634.1-201ENST00000438758 1403 ntBASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 NSUN5P1-202ENST00000421140 1535 ntBASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 NSUN5P2-203ENST00000457352 1529 ntBASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 AC092068.3-201ENST00000587894 2016 ntBASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 IGHV3-47-201ENST00000425060 335 ntBASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 AC103564.2-201ENST00000432853 1299 ntBASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 AC122714.2-201ENST00000502787 707 ntBASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 AC005336.2-201ENST00000593183 939 ntBASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 AL138831.2-201ENST00000606564 490 ntBASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LIN7CQ9NUP9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms