Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 SUPT20HL2-201ENST00000486479 2409 ntBASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 HLA-G-203ENST00000376818 1127 ntBASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 RPS2P7-201ENST00000447334 885 ntBASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 AC013726.1-201ENST00000563747 2285 ntBASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 AL591122.2-201ENST00000624125 1853 ntBASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms