Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 Z83836.1-201ENST00000624605 1642 ntBASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PCDHB16Q9NRJ7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 AC099063.4-201ENST00000641099 1602 ntBASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 AC063952.2-201ENST00000498792 1227 ntBASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 KRT18P21-201ENST00000515767 1272 ntBASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 AC006011.2-201ENST00000621313 1158 ntBASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHB16Q9NRJ7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms