Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HPS4Q9NQG7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 AC109322.1-201ENST00000524499 1264 ntBASIC17.58■□□□□ 0.4
HPS4Q9NQG7 AC004449.1-201ENST00000564240 433 ntBASIC17.58■□□□□ 0.4
HPS4Q9NQG7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 AC099522.2-201ENST00000607001 744 ntBASIC17.58■□□□□ 0.4
HPS4Q9NQG7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.58■□□□□ 0.4
HPS4Q9NQG7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 LYSMD4-203ENST00000378904 2122 ntBASIC17.57■□□□□ 0.4
HPS4Q9NQG7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 AC023141.5-201ENST00000458585 616 ntBASIC17.57■□□□□ 0.4
HPS4Q9NQG7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 AC093520.2-201ENST00000561830 333 ntBASIC17.57■□□□□ 0.4
HPS4Q9NQG7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS4Q9NQG7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.56■□□□□ 0.4
HPS4Q9NQG7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 AC002056.1-201ENST00000395613 760 ntBASIC17.56■□□□□ 0.4
HPS4Q9NQG7 AL355306.1-201ENST00000415580 579 ntBASIC17.56■□□□□ 0.4
HPS4Q9NQG7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HPS4Q9NQG7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms