Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 MCCD1P1-208ENST00000445732 328 ntBASIC20.16■□□□□ 0.82
RTN4Q9NQC3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 AC117489.1-201ENST00000625169 3217 ntBASIC20.16■□□□□ 0.82
RTN4Q9NQC3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 AC093010.1-201ENST00000473625 1624 ntBASIC20.16■□□□□ 0.82
RTN4Q9NQC3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTN4Q9NQC3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 FAM45BP-202ENST00000592932 1624 ntBASIC20.15■□□□□ 0.82
RTN4Q9NQC3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.15■□□□□ 0.82
RTN4Q9NQC3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN4Q9NQC3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC20.14■□□□□ 0.82
RTN4Q9NQC3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTN4Q9NQC3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTN4Q9NQC3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 AL691447.1-201ENST00000419456 387 ntBASIC20.14■□□□□ 0.81
RTN4Q9NQC3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RTN4Q9NQC3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC20.14■□□□□ 0.81
RTN4Q9NQC3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms