Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 KRT18P13-201ENST00000400056 1290 ntBASIC17.52■□□□□ 0.4
USP29Q9HBJ7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 AC106730.1-201ENST00000566722 1090 ntBASIC17.52■□□□□ 0.4
USP29Q9HBJ7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 AL353135.1-201ENST00000606729 504 ntBASIC17.52■□□□□ 0.4
USP29Q9HBJ7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.52■□□□□ 0.4
USP29Q9HBJ7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
USP29Q9HBJ7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.52■□□□□ 0.39
USP29Q9HBJ7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
USP29Q9HBJ7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
USP29Q9HBJ7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP29Q9HBJ7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP29Q9HBJ7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP29Q9HBJ7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 BX005266.1-201ENST00000473402 457 ntBASIC17.51■□□□□ 0.39
USP29Q9HBJ7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 NKAPP1-205ENST00000585790 367 ntBASIC17.51■□□□□ 0.39
USP29Q9HBJ7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.51■□□□□ 0.39
USP29Q9HBJ7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 ZNF259P1-201ENST00000407656 1365 ntBASIC17.51■□□□□ 0.39
USP29Q9HBJ7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP29Q9HBJ7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 TUBB8P12-201ENST00000308911 1335 ntBASIC17.5■□□□□ 0.39
USP29Q9HBJ7 TUBB7P-202ENST00000428444 1305 ntBASIC17.5■□□□□ 0.39
USP29Q9HBJ7 TUBB8P7-204ENST00000567960 1332 ntBASIC17.5■□□□□ 0.39
USP29Q9HBJ7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 AC148477.8-201ENST00000624298 468 ntBASIC17.5■□□□□ 0.39
USP29Q9HBJ7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 FAM215A-202ENST00000632077 792 ntBASIC17.5■□□□□ 0.39
USP29Q9HBJ7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.5■□□□□ 0.39
USP29Q9HBJ7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms