Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SLC43A3-213ENST00000529494 560 ntTSL 421.95■■□□□ 1.15e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-207ENST00000526125 554 ntTSL 521.93■■□□□ 1.15e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-219ENST00000530316 573 ntTSL 421.93■■□□□ 1.15e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-224ENST00000533245 589 ntTSL 521.93■■□□□ 1.15e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.15e-6■■□□□ 13
XRN2Q9H0D6 GPAA1-205ENST00000525308 903 ntTSL 221.68■■□□□ 1.065e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-210ENST00000528187 648 ntTSL 520.83■□□□□ 0.935e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.885e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.54■□□□□ 0.885e-6■■□□□ 13
XRN2Q9H0D6 GPAA1-203ENST00000524418 825 ntTSL 319.43■□□□□ 0.75e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-206ENST00000446063 1262 ntTSL 1 (best)19.35■□□□□ 0.695e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-202ENST00000339046 1202 ntTSL 219.16■□□□□ 0.665e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.665e-6■■□□□ 13
XRN2Q9H0D6 MIB2-222ENST00000507229 2582 ntTSL 219.12■□□□□ 0.655e-6■■□□□ 13
XRN2Q9H0D6 MIB2-229ENST00000514234 2562 ntTSL 218.94■□□□□ 0.625e-6■■□□□ 13
XRN2Q9H0D6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.66■□□□□ 0.585e-6■■□□□ 13
XRN2Q9H0D6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.36■□□□□ 0.535e-6■■□□□ 13
XRN2Q9H0D6 MIB2-213ENST00000487053 3252 ntTSL 518.25■□□□□ 0.515e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.515e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-222ENST00000533051 571 ntTSL 217.61■□□□□ 0.415e-6■■□□□ 13
XRN2Q9H0D6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.45e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-221ENST00000532795 587 ntTSL 417.33■□□□□ 0.365e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-223ENST00000533235 581 ntTSL 517.33■□□□□ 0.365e-6■■□□□ 13
XRN2Q9H0D6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.345e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.315e-6■■□□□ 13
XRN2Q9H0D6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.315e-6■■□□□ 13
XRN2Q9H0D6 GAPDH-209ENST00000492719 930 ntTSL 316.85■□□□□ 0.292e-6■■□□□ 13
XRN2Q9H0D6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.265e-6■■□□□ 13
XRN2Q9H0D6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.235e-6■■□□□ 13
XRN2Q9H0D6 MIB2-220ENST00000506488 2997 ntTSL 516.4■□□□□ 0.225e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-212ENST00000484523 582 ntTSL 516.33■□□□□ 0.25e-6■■□□□ 13
XRN2Q9H0D6 GPAA1-208ENST00000527144 767 ntTSL 316.3■□□□□ 0.25e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-204ENST00000524863 539 ntTSL 316.2■□□□□ 0.185e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-208ENST00000526621 562 ntTSL 416.2■□□□□ 0.185e-6■■□□□ 13
XRN2Q9H0D6 MIB2-210ENST00000479659 4247 ntTSL 215.91■□□□□ 0.145e-6■■□□□ 13
XRN2Q9H0D6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.095e-6■■□□□ 13
XRN2Q9H0D6 MIB2-214ENST00000489635 3034 ntTSL 215.41■□□□□ 0.065e-6■■□□□ 13
XRN2Q9H0D6 MIB2-226ENST00000511502 3326 ntTSL 215.07■□□□□ 05e-6■■□□□ 13
XRN2Q9H0D6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.045e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-208ENST00000461200 3325 ntTSL 214.48□□□□□ -0.095e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-206ENST00000525474 801 ntTSL 512.73□□□□□ -0.375e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-215ENST00000529748 397 ntTSL 312.53□□□□□ -0.45e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-202ENST00000395123 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.445e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-201ENST00000352187 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.515e-6■■□□□ 13
XRN2Q9H0D6 PHYKPL-204ENST00000474052 1539 ntTSL 1 (best)27.44■■□□□ 1.982e-6■■□□□ 13
XRN2Q9H0D6 PHYKPL-211ENST00000494126 2297 ntTSL 1 (best)25.81■■□□□ 1.722e-6■■□□□ 13
XRN2Q9H0D6 PHYKPL-209ENST00000489262 2780 ntTSL 221.15■□□□□ 0.982e-6■■□□□ 13
XRN2Q9H0D6 PHYKPL-210ENST00000493197 1969 ntTSL 220.94■□□□□ 0.942e-6■■□□□ 13
XRN2Q9H0D6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.862e-6■■□□□ 13
XRN2Q9H0D6 PHYKPL-202ENST00000323594 739 ntTSL 514.23□□□□□ -0.132e-6■■□□□ 13
XRN2Q9H0D6 PHYKPL-217ENST00000511716 562 ntTSL 311.46□□□□□ -0.572e-6■■□□□ 13
XRN2Q9H0D6 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC9.56□□□□□ -0.882e-6■■□□□ 13
XRN2Q9H0D6 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.182e-9■■□□□ 13
XRN2Q9H0D6 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.455e-8■■□□□ 13
XRN2Q9H0D6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.53■□□□□ 0.081e-6■■□□□ 13
XRN2Q9H0D6 YES1-204ENST00000581960 487 ntTSL 329.95■■■□□ 2.391e-6■■□□□ 13
XRN2Q9H0D6 YES1-202ENST00000577611 568 ntTSL 424.13■■□□□ 1.451e-6■■□□□ 13
XRN2Q9H0D6 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.021e-6■■□□□ 13
XRN2Q9H0D6 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.131e-6■■□□□ 13
XRN2Q9H0D6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.443e-7■■□□□ 13
XRN2Q9H0D6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.033e-7■■□□□ 13
XRN2Q9H0D6 AL132780.3-201ENST00000555074 835 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.453e-7■■□□□ 13
XRN2Q9H0D6 TRIOBP-209ENST00000428075 931 ntTSL 233.6■■■□□ 2.971e-8■■□□□ 13
XRN2Q9H0D6 LMF2-203ENST00000504717 1233 ntTSL 531.37■■■□□ 2.611e-8■■□□□ 13
XRN2Q9H0D6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.67■■■□□ 2.51e-8■■□□□ 13
XRN2Q9H0D6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.37■■■□□ 2.451e-8■■□□□ 13
XRN2Q9H0D6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.67■■■□□ 2.341e-8■■□□□ 13
XRN2Q9H0D6 STARD10-210ENST00000537947 1100 ntTSL 328.83■■■□□ 2.211e-8■■□□□ 13
XRN2Q9H0D6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.191e-8■■□□□ 13
XRN2Q9H0D6 TRIOBP-206ENST00000413051 904 ntTSL 527.19■■□□□ 1.941e-8■■□□□ 13
XRN2Q9H0D6 SAFB2-203ENST00000587802 583 ntTSL 326.28■■□□□ 1.81e-8■■□□□ 13
XRN2Q9H0D6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.581e-8■■□□□ 13
XRN2Q9H0D6 MKLN1-208ENST00000494286 582 ntTSL 421.69■■□□□ 1.061e-8■■□□□ 13
XRN2Q9H0D6 STARD10-212ENST00000538437 747 ntTSL 221.64■■□□□ 1.051e-8■■□□□ 13
XRN2Q9H0D6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.051e-8■■□□□ 13
XRN2Q9H0D6 MKLN1-205ENST00000446815 551 ntTSL 421.47■■□□□ 1.031e-8■■□□□ 13
XRN2Q9H0D6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.011e-8■■□□□ 13
XRN2Q9H0D6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.69■□□□□ 0.91e-8■■□□□ 13
XRN2Q9H0D6 STARD10-217ENST00000543089 506 ntTSL 1 (best)20.23■□□□□ 0.831e-8■■□□□ 13
XRN2Q9H0D6 SAFB2-204ENST00000589925 506 ntTSL 319.74■□□□□ 0.751e-8■■□□□ 13
XRN2Q9H0D6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.36■□□□□ 0.691e-8■■□□□ 13
XRN2Q9H0D6 SELENOW-213ENST00000601419 717 ntTSL 219.34■□□□□ 0.691e-8■■□□□ 13
XRN2Q9H0D6 SELENOW-211ENST00000599874 636 ntTSL 219.32■□□□□ 0.681e-8■■□□□ 13
XRN2Q9H0D6 STARD10-204ENST00000535075 526 ntTSL 219.1■□□□□ 0.651e-8■■□□□ 13
XRN2Q9H0D6 COASY-209ENST00000588353 387 ntTSL 319.04■□□□□ 0.641e-8■■□□□ 13
XRN2Q9H0D6 TKT-212ENST00000483706 565 ntTSL 218.78■□□□□ 0.61e-8■■□□□ 13
XRN2Q9H0D6 STARD10-219ENST00000544767 509 ntTSL 318.39■□□□□ 0.531e-8■■□□□ 13
XRN2Q9H0D6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.01■□□□□ 0.471e-8■■□□□ 13
XRN2Q9H0D6 COASY-214ENST00000591779 994 ntTSL 217.98■□□□□ 0.471e-8■■□□□ 13
XRN2Q9H0D6 SELENOW-209ENST00000599590 572 ntTSL 417.19■□□□□ 0.341e-8■■□□□ 13
XRN2Q9H0D6 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.19■□□□□ 0.341e-8■■□□□ 13
XRN2Q9H0D6 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.341e-8■■□□□ 13
XRN2Q9H0D6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.31e-8■■□□□ 13
XRN2Q9H0D6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.59■□□□□ 0.251e-8■■□□□ 13
XRN2Q9H0D6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.181e-8■■□□□ 13
XRN2Q9H0D6 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.161e-8■■□□□ 13
XRN2Q9H0D6 SELENOW-208ENST00000599302 636 ntTSL 316.05■□□□□ 0.161e-8■■□□□ 13
XRN2Q9H0D6 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.151e-8■■□□□ 13
XRN2Q9H0D6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.91■□□□□ 0.141e-8■■□□□ 13
XRN2Q9H0D6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.091e-8■■□□□ 13
Retrieved 100 of 21,068 protein–RNA pairs in 118 ms