Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 AC122714.2-201ENST00000502787 707 ntBASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 IGHV3-52-201ENST00000519770 353 ntBASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 PCDHA14-201ENST00000506751 2298 ntBASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 LINC00265-3P-201ENST00000447588 903 ntBASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 AC009533.2-201ENST00000543664 586 ntBASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 Z69720.1-201ENST00000601483 472 ntBASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 AL049757.1-201ENST00000616842 1596 ntBASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 AC016396.2-201ENST00000562575 1417 ntBASIC13.56□□□□□ -0.24
CHRDL1Q9BU40 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms