Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 KRT18P1-202ENST00000452408 1331 ntBASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.11□□□□□ -0.31
SHANK2-AS3Q9BTD1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 AL513523.2-202ENST00000427283 2040 ntBASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 AC079328.2-201ENST00000561241 3354 ntBASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 RCN1P1-201ENST00000400413 996 ntBASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 TMPOP1-202ENST00000424642 1267 ntBASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 DUX4L17-201ENST00000557360 1267 ntBASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 AC005332.1-201ENST00000577698 1310 ntBASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 AC148477.5-201ENST00000625164 1645 ntBASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 LINC00895-201ENST00000629028 1637 ntBASIC13.1□□□□□ -0.31
SHANK2-AS3Q9BTD1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 AL031133.1-201ENST00000406807 723 ntBASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 SPDYE21P-201ENST00000413323 827 ntBASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 DRAXINP1-201ENST00000437611 948 ntBASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 TSSC2-201ENST00000450217 709 ntBASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 KRT17P6-201ENST00000453795 1220 ntBASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 HLA-J-202ENST00000469281 1241 ntBASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SHANK2-AS3Q9BTD1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms