Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN18Q99952 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN18Q99952 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PTPN18Q99952 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN18Q99952 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN18Q99952 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN18Q99952 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN18Q99952 AC011495.1-201ENST00000498085 584 ntBASIC19.24■□□□□ 0.67
PTPN18Q99952 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN18Q99952 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN18Q99952 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN18Q99952 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.24■□□□□ 0.67
PTPN18Q99952 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.24■□□□□ 0.67
PTPN18Q99952 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
PTPN18Q99952 AC012317.2-201ENST00000623305 2251 ntBASIC19.24■□□□□ 0.67
PTPN18Q99952 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN18Q99952 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PTPN18Q99952 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PTPN18Q99952 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN18Q99952 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN18Q99952 AL355312.1-201ENST00000407115 2176 ntBASIC19.23■□□□□ 0.67
PTPN18Q99952 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN18Q99952 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN18Q99952 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN18Q99952 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PTPN18Q99952 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PTPN18Q99952 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN18Q99952 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN18Q99952 SLC25A1P3-201ENST00000395415 828 ntBASIC19.23■□□□□ 0.67
PTPN18Q99952 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN18Q99952 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.23■□□□□ 0.67
PTPN18Q99952 AC119751.2-201ENST00000504529 210 ntBASIC19.23■□□□□ 0.67
PTPN18Q99952 AC092658.1-201ENST00000505836 891 ntBASIC19.23■□□□□ 0.67
PTPN18Q99952 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN18Q99952 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN18Q99952 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN18Q99952 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PTPN18Q99952 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN18Q99952 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN18Q99952 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN18Q99952 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN18Q99952 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN18Q99952 AC104581.1-202ENST00000635932 2618 ntBASIC19.22■□□□□ 0.67
PTPN18Q99952 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PTPN18Q99952 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN18Q99952 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN18Q99952 AC073439.1-201ENST00000624121 1774 ntBASIC19.22■□□□□ 0.67
PTPN18Q99952 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN18Q99952 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN18Q99952 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN18Q99952 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN18Q99952 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN18Q99952 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN18Q99952 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN18Q99952 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.22■□□□□ 0.67
PTPN18Q99952 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN18Q99952 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN18Q99952 RN7SL837P-201ENST00000463010 287 ntBASIC19.22■□□□□ 0.67
PTPN18Q99952 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.22■□□□□ 0.67
PTPN18Q99952 AL512361.1-201ENST00000554200 418 ntBASIC19.22■□□□□ 0.67
PTPN18Q99952 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN18Q99952 AL033527.4-201ENST00000641026 673 ntBASIC19.22■□□□□ 0.67
PTPN18Q99952 KRT8P49-201ENST00000604166 1432 ntBASIC19.22■□□□□ 0.67
PTPN18Q99952 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN18Q99952 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PTPN18Q99952 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN18Q99952 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN18Q99952 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN18Q99952 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN18Q99952 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN18Q99952 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN18Q99952 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.21■□□□□ 0.67
PTPN18Q99952 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN18Q99952 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN18Q99952 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN18Q99952 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN18Q99952 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PTPN18Q99952 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN18Q99952 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN18Q99952 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN18Q99952 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN18Q99952 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN18Q99952 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.21■□□□□ 0.67
PTPN18Q99952 AC093004.1-201ENST00000508850 424 ntBASIC19.21■□□□□ 0.67
PTPN18Q99952 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN18Q99952 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN18Q99952 AC044860.1-202ENST00000559481 777 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms