Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC125807.1-201ENST00000483097 614 ntBASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 KRT18P34-201ENST00000488218 1270 ntBASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 AL645728.1-201ENST00000366221 2101 ntBASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 AC005915.1-201ENST00000624912 2018 ntBASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 AL023806.1-201ENST00000603994 1649 ntBASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 AC006277.1-201ENST00000624348 1610 ntBASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP2Q96SN8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 SPDYE7P-202ENST00000420373 878 ntBASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 SLC25A39P2-201ENST00000537614 270 ntBASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 AL512356.2-201ENST00000546955 174 ntBASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 DUX4L27-201ENST00000554796 1261 ntBASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 AC025678.2-201ENST00000562061 970 ntBASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 AC021097.1-201ENST00000607902 574 ntBASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 AC120498.9-201ENST00000339021 3867 ntBASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 AL603756.1-201ENST00000606511 2163 ntBASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 KRT8P39-201ENST00000396270 1433 ntBASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP2Q96SN8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 FAM8A3P-201ENST00000427218 844 ntBASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 UGT1A2P-201ENST00000454886 866 ntBASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 AP001350.2-201ENST00000625104 1094 ntBASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 AL031731.1-201ENST00000642131 2094 ntBASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP2Q96SN8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 TSSK5P-201ENST00000423978 907 ntBASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 AL158211.3-201ENST00000607385 239 ntBASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 TUBB3P1-201ENST00000405796 1332 ntBASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms