Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 AC069335.1-201ENST00000489972 472 ntBASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 RARRES2P8-201ENST00000566335 367 ntBASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 AL009183.1-201ENST00000603760 355 ntBASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 AC016396.2-201ENST00000562575 1417 ntBASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CCDC85AQ96PX6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC85AQ96PX6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC85AQ96PX6 AC092053.1-201ENST00000605787 1936 ntBASIC21.02■□□□□ 0.95
CCDC85AQ96PX6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC85AQ96PX6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 AL353732.1-201ENST00000569618 1459 ntBASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC85AQ96PX6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC85AQ96PX6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCDC85AQ96PX6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21■□□□□ 0.95
CCDC85AQ96PX6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 SPCS2P4-201ENST00000436160 681 ntBASIC21■□□□□ 0.95
CCDC85AQ96PX6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21■□□□□ 0.95
CCDC85AQ96PX6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21■□□□□ 0.95
CCDC85AQ96PX6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21■□□□□ 0.95
CCDC85AQ96PX6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CCDC85AQ96PX6 Z92544.3-201ENST00000624747 417 ntBASIC21■□□□□ 0.95
CCDC85AQ96PX6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC85AQ96PX6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21■□□□□ 0.95
CCDC85AQ96PX6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21■□□□□ 0.95
CCDC85AQ96PX6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCDC85AQ96PX6 RNF165-205ENST00000588679 2904 ntBASIC21■□□□□ 0.95
CCDC85AQ96PX6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC85AQ96PX6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 FAM86C2P-203ENST00000528684 1004 ntBASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 AC009093.7-201ENST00000623853 1223 ntBASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC85AQ96PX6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms