Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 MIR661-201ENST00000384842 89 ntBASIC19.87■□□□□ 0.77
TRIM47Q96LD4 AC236430.1-201ENST00000402231 743 ntBASIC19.87■□□□□ 0.77
TRIM47Q96LD4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 AC002472.2-201ENST00000442739 958 ntBASIC19.87■□□□□ 0.77
TRIM47Q96LD4 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 AC087641.1-201ENST00000557561 1021 ntBASIC19.87■□□□□ 0.77
TRIM47Q96LD4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM47Q96LD4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 AC055876.3-201ENST00000431496 288 ntBASIC19.86■□□□□ 0.77
TRIM47Q96LD4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 AC005225.4-201ENST00000557330 545 ntBASIC19.86■□□□□ 0.77
TRIM47Q96LD4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 RN7SL204P-201ENST00000582831 262 ntBASIC19.86■□□□□ 0.77
TRIM47Q96LD4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 ACTL9-202ENST00000612068 1252 ntBASIC19.86■□□□□ 0.77
TRIM47Q96LD4 AC138649.4-201ENST00000612222 287 ntBASIC19.86■□□□□ 0.77
TRIM47Q96LD4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM47Q96LD4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.85■□□□□ 0.77
TRIM47Q96LD4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms