Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SIPA1Q96FS4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17■□□□□ 0.31
SIPA1Q96FS4 PKD1P1-201ENST00000458669 6805 ntBASIC17■□□□□ 0.31
SIPA1Q96FS4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 KRT18P32-201ENST00000424695 1287 ntBASIC17■□□□□ 0.31
SIPA1Q96FS4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17■□□□□ 0.31
SIPA1Q96FS4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17■□□□□ 0.31
SIPA1Q96FS4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SIPA1Q96FS4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17■□□□□ 0.31
SIPA1Q96FS4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17■□□□□ 0.31
SIPA1Q96FS4 SPCS2P1-201ENST00000561636 679 ntBASIC17■□□□□ 0.31
SIPA1Q96FS4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17■□□□□ 0.31
SIPA1Q96FS4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17■□□□□ 0.31
SIPA1Q96FS4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
SIPA1Q96FS4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17■□□□□ 0.31
SIPA1Q96FS4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17■□□□□ 0.31
SIPA1Q96FS4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SIPA1Q96FS4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17■□□□□ 0.31
SIPA1Q96FS4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SIPA1Q96FS4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 AC016396.2-201ENST00000562575 1417 ntBASIC16.99■□□□□ 0.31
SIPA1Q96FS4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 HCG4-201ENST00000418983 998 ntBASIC16.99■□□□□ 0.31
SIPA1Q96FS4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 AC067863.1-201ENST00000494933 530 ntBASIC16.99■□□□□ 0.31
SIPA1Q96FS4 IGHV3-62-201ENST00000520057 340 ntBASIC16.99■□□□□ 0.31
SIPA1Q96FS4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SIPA1Q96FS4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 AL390961.4-201ENST00000623958 2535 ntBASIC16.98■□□□□ 0.31
SIPA1Q96FS4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 AC069335.1-201ENST00000489972 472 ntBASIC16.98■□□□□ 0.31
SIPA1Q96FS4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 Z92544.3-201ENST00000624747 417 ntBASIC16.98■□□□□ 0.31
SIPA1Q96FS4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIPA1Q96FS4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms