Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RHBDF1Q96CC6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RHBDF1Q96CC6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RHBDF1Q96CC6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 KRT8P49-201ENST00000604166 1432 ntBASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 LAGE3P1-201ENST00000425356 484 ntBASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 AC107918.4-202ENST00000641623 219 ntBASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RHBDF1Q96CC6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 AL603756.1-201ENST00000606511 2163 ntBASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 PTCHD3P3-201ENST00000403073 906 ntBASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 DUSP5P1-201ENST00000441325 1139 ntBASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 AC006504.4-201ENST00000592118 1568 ntBASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 AL391256.1-201ENST00000443260 1855 ntBASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RHBDF1Q96CC6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 LINC00895-201ENST00000629028 1637 ntBASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 ELK2BP-201ENST00000415014 1224 ntBASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 EMBP1-201ENST00000458200 901 ntBASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.53■□□□□ 0.24
RHBDF1Q96CC6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms