Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 AC112492.5-201ENST00000421897 457 ntBASIC16.78■□□□□ 0.28
CLDN23Q96B33 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 AC098859.1-201ENST00000502915 1238 ntBASIC16.78■□□□□ 0.28
CLDN23Q96B33 KRT17P8-201ENST00000540749 863 ntBASIC16.78■□□□□ 0.28
CLDN23Q96B33 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 CHCHD2P3-201ENST00000603038 451 ntBASIC16.78■□□□□ 0.28
CLDN23Q96B33 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN23Q96B33 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN23Q96B33 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN23Q96B33 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN23Q96B33 AL021920.2-201ENST00000624828 1351 ntBASIC16.77■□□□□ 0.28
CLDN23Q96B33 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN23Q96B33 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN23Q96B33 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN23Q96B33 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN23Q96B33 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN23Q96B33 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN23Q96B33 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN23Q96B33 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN23Q96B33 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN23Q96B33 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLDN23Q96B33 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
CLDN23Q96B33 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN23Q96B33 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN23Q96B33 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 AC133963.1-201ENST00000504166 1679 ntBASIC16.76■□□□□ 0.27
CLDN23Q96B33 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 DOC2GP-202ENST00000514950 1163 ntBASIC16.76■□□□□ 0.27
CLDN23Q96B33 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 RAB43P1-201ENST00000561790 589 ntBASIC16.76■□□□□ 0.27
CLDN23Q96B33 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 AC008494.3-201ENST00000606615 944 ntBASIC16.76■□□□□ 0.27
CLDN23Q96B33 AL023806.1-201ENST00000603994 1649 ntBASIC16.76■□□□□ 0.27
CLDN23Q96B33 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN23Q96B33 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN23Q96B33 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms