Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE4Q96A23 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CPNE4Q96A23 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.27■□□□□ 0.04
CPNE4Q96A23 MED15P5-201ENST00000423150 992 ntBASIC15.27■□□□□ 0.04
CPNE4Q96A23 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.27■□□□□ 0.04
CPNE4Q96A23 VN2R19P-201ENST00000442399 1052 ntBASIC15.27■□□□□ 0.04
CPNE4Q96A23 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.27■□□□□ 0.04
CPNE4Q96A23 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.27■□□□□ 0.04
CPNE4Q96A23 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE4Q96A23 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE4Q96A23 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE4Q96A23 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE4Q96A23 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE4Q96A23 FAM197Y3-203ENST00000618346 717 ntBASIC15.27■□□□□ 0.04
CPNE4Q96A23 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.27■□□□□ 0.03
CPNE4Q96A23 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
CPNE4Q96A23 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CPNE4Q96A23 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE4Q96A23 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE4Q96A23 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.27■□□□□ 0.03
CPNE4Q96A23 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CPNE4Q96A23 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE4Q96A23 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE4Q96A23 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE4Q96A23 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE4Q96A23 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 AC129492.6-201ENST00000611383 1305 ntBASIC15.26■□□□□ 0.03
CPNE4Q96A23 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 RNA5SP416-201ENST00000516838 111 ntBASIC15.26■□□□□ 0.03
CPNE4Q96A23 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE4Q96A23 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CPNE4Q96A23 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 MIR574-201ENST00000385209 96 ntBASIC15.25■□□□□ 0.03
CPNE4Q96A23 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 NFIC-211ENST00000641145 8399 ntBASIC15.25■□□□□ 0.03
CPNE4Q96A23 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms