Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 DGCR5-201ENST00000399539 862 ntBASIC20.59■□□□□ 0.89
CNKSR1Q969H4 AC087499.6-201ENST00000411576 835 ntBASIC20.59■□□□□ 0.89
CNKSR1Q969H4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 INE1-201ENST00000456273 945 ntBASIC20.59■□□□□ 0.89
CNKSR1Q969H4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 MIR4492-201ENST00000581627 80 ntBASIC20.59■□□□□ 0.89
CNKSR1Q969H4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 BCL2-203ENST00000589955 5011 ntBASIC20.59■□□□□ 0.89
CNKSR1Q969H4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 AL391825.1-201ENST00000457671 1364 ntBASIC20.59■□□□□ 0.89
CNKSR1Q969H4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CNKSR1Q969H4 AL021920.2-201ENST00000624828 1351 ntBASIC20.59■□□□□ 0.89
CNKSR1Q969H4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 AC133963.1-201ENST00000504166 1679 ntBASIC20.58■□□□□ 0.89
CNKSR1Q969H4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 AP006294.1-201ENST00000415407 339 ntBASIC20.58■□□□□ 0.89
CNKSR1Q969H4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 AC135586.1-201ENST00000539323 574 ntBASIC20.58■□□□□ 0.89
CNKSR1Q969H4 AC104794.3-201ENST00000566840 1248 ntBASIC20.58■□□□□ 0.89
CNKSR1Q969H4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.58■□□□□ 0.89
CNKSR1Q969H4 SPTSSB-204ENST00000617024 1292 ntBASIC20.58■□□□□ 0.89
CNKSR1Q969H4 AL162274.1-201ENST00000617191 1098 ntBASIC20.58■□□□□ 0.89
CNKSR1Q969H4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.58■□□□□ 0.88
CNKSR1Q969H4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
CNKSR1Q969H4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CNKSR1Q969H4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNKSR1Q969H4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 BTBD7P1-201ENST00000447253 1453 ntBASIC20.57■□□□□ 0.88
CNKSR1Q969H4 BX323043.1-201ENST00000641006 1765 ntBASIC20.57■□□□□ 0.88
CNKSR1Q969H4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.57■□□□□ 0.88
CNKSR1Q969H4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR1Q969H4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CNKSR1Q969H4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.56■□□□□ 0.88
CNKSR1Q969H4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CNKSR1Q969H4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CNKSR1Q969H4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR1Q969H4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR1Q969H4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CNKSR1Q969H4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR1Q969H4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CNKSR1Q969H4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.56■□□□□ 0.88
CNKSR1Q969H4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms