Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6NLQ92738 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 NOC2LP1-202ENST00000452600 2235 ntBASIC19.13■□□□□ 0.65
USP6NLQ92738 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
USP6NLQ92738 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6NLQ92738 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP6NLQ92738 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
USP6NLQ92738 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.12■□□□□ 0.65
USP6NLQ92738 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 OR8S1-201ENST00000310194 1080 ntBASIC19.12■□□□□ 0.65
USP6NLQ92738 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 COX5BP8-201ENST00000416911 349 ntBASIC19.12■□□□□ 0.65
USP6NLQ92738 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.12■□□□□ 0.65
USP6NLQ92738 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP6NLQ92738 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.12■□□□□ 0.65
USP6NLQ92738 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP6NLQ92738 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.11■□□□□ 0.65
USP6NLQ92738 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.11■□□□□ 0.65
USP6NLQ92738 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.11■□□□□ 0.65
USP6NLQ92738 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.11■□□□□ 0.65
USP6NLQ92738 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 AC007274.1-201ENST00000439805 662 ntBASIC19.11■□□□□ 0.65
USP6NLQ92738 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 SPTLC1P1-201ENST00000447199 261 ntBASIC19.11■□□□□ 0.65
USP6NLQ92738 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.11■□□□□ 0.65
USP6NLQ92738 AC018529.1-201ENST00000613063 361 ntBASIC19.11■□□□□ 0.65
USP6NLQ92738 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
USP6NLQ92738 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.11■□□□□ 0.65
USP6NLQ92738 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
USP6NLQ92738 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
USP6NLQ92738 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6NLQ92738 AC022144.1-201ENST00000602255 1580 ntBASIC19.1■□□□□ 0.65
USP6NLQ92738 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
USP6NLQ92738 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6NLQ92738 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6NLQ92738 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6NLQ92738 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.1■□□□□ 0.65
USP6NLQ92738 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.1■□□□□ 0.65
USP6NLQ92738 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6NLQ92738 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
USP6NLQ92738 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6NLQ92738 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6NLQ92738 RARRES2P9-201ENST00000565168 469 ntBASIC19.1■□□□□ 0.65
USP6NLQ92738 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP6NLQ92738 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms