Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 AC010491.1-201ENST00000563101 2797 ntBASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CKAP2Q8WWK9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 HLA-F-220ENST00000434407 884 ntBASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 RASA4DP-201ENST00000460726 1199 ntBASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 ECEL1P2-202ENST00000465689 757 ntBASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 AC111152.3-201ENST00000569699 673 ntBASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 Z99916.2-201ENST00000604037 246 ntBASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 FAM87A-204ENST00000613235 858 ntBASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 AC099063.4-201ENST00000641099 1602 ntBASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.92■□□□□ 0.3
CKAP2Q8WWK9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 AC022532.1-201ENST00000624563 1728 ntBASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 AL596275.1-201ENST00000423464 877 ntBASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 AP003733.1-201ENST00000491725 852 ntBASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms