Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 NKILA-202ENST00000614771 2598 ntBASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 AL021920.2-201ENST00000624828 1351 ntBASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 AC087163.2-201ENST00000457299 853 ntBASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 AC108073.2-201ENST00000464002 357 ntBASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 RNA5SP415-201ENST00000517246 115 ntBASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC12Q8WUD4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 AC011676.5-201ENST00000624864 2660 ntBASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 PRSS29P-201ENST00000440800 595 ntBASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 AC145285.3-201ENST00000564603 959 ntBASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 Z83851.2-201ENST00000609564 659 ntBASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 AC120114.3-201ENST00000611923 658 ntBASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC12Q8WUD4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 AC092053.1-201ENST00000605787 1936 ntBASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 TUBB8P12-201ENST00000308911 1335 ntBASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 TUBB7P-202ENST00000428444 1305 ntBASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 TUBB8P7-204ENST00000567960 1332 ntBASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 AC009947.1-201ENST00000444350 727 ntBASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC12Q8WUD4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms