Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.44■□□□□ 0.86
SNED1Q8TER0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.44■□□□□ 0.86
SNED1Q8TER0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.44■□□□□ 0.86
SNED1Q8TER0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNED1Q8TER0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNED1Q8TER0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNED1Q8TER0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.44■□□□□ 0.86
SNED1Q8TER0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.44■□□□□ 0.86
SNED1Q8TER0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNED1Q8TER0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SNED1Q8TER0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
SNED1Q8TER0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNED1Q8TER0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNED1Q8TER0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SNED1Q8TER0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.44■□□□□ 0.86
SNED1Q8TER0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SNED1Q8TER0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNED1Q8TER0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNED1Q8TER0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNED1Q8TER0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.44■□□□□ 0.86
SNED1Q8TER0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNED1Q8TER0 AL035456.1-201ENST00000456064 1369 ntBASIC20.43■□□□□ 0.86
SNED1Q8TER0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.43■□□□□ 0.86
SNED1Q8TER0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SNED1Q8TER0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SNED1Q8TER0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SNED1Q8TER0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SNED1Q8TER0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 KRT17P7-201ENST00000451704 1104 ntBASIC20.43■□□□□ 0.86
SNED1Q8TER0 PRYP6-201ENST00000514804 343 ntBASIC20.43■□□□□ 0.86
SNED1Q8TER0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 AC138969.3-201ENST00000546612 1459 ntBASIC20.43■□□□□ 0.86
SNED1Q8TER0 AC138932.2-201ENST00000548268 1459 ntBASIC20.43■□□□□ 0.86
SNED1Q8TER0 AC126755.4-201ENST00000549796 1459 ntBASIC20.43■□□□□ 0.86
SNED1Q8TER0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNED1Q8TER0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNED1Q8TER0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNED1Q8TER0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNED1Q8TER0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.42■□□□□ 0.86
SNED1Q8TER0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNED1Q8TER0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNED1Q8TER0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.42■□□□□ 0.86
SNED1Q8TER0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.42■□□□□ 0.86
SNED1Q8TER0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNED1Q8TER0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNED1Q8TER0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.42■□□□□ 0.86
SNED1Q8TER0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
SNED1Q8TER0 GIMAP3P-201ENST00000495150 836 ntBASIC20.42■□□□□ 0.86
SNED1Q8TER0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.42■□□□□ 0.86
SNED1Q8TER0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNED1Q8TER0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
SNED1Q8TER0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNED1Q8TER0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNED1Q8TER0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SNED1Q8TER0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNED1Q8TER0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SNED1Q8TER0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.42■□□□□ 0.86
SNED1Q8TER0 FRMD8P1-201ENST00000440433 1524 ntBASIC20.41■□□□□ 0.86
SNED1Q8TER0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNED1Q8TER0 KRT8P49-201ENST00000604166 1432 ntBASIC20.41■□□□□ 0.86
SNED1Q8TER0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNED1Q8TER0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNED1Q8TER0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNED1Q8TER0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNED1Q8TER0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNED1Q8TER0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNED1Q8TER0 GPR53P-205ENST00000457298 1084 ntBASIC20.41■□□□□ 0.86
SNED1Q8TER0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNED1Q8TER0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNED1Q8TER0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SNED1Q8TER0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNED1Q8TER0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.4■□□□□ 0.86
SNED1Q8TER0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms