Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 AL138966.2-201ENST00000621997 464 ntBASIC16.58■□□□□ 0.24
HIPK4Q8NE63 AC066615.1-201ENST00000640911 628 ntBASIC16.58■□□□□ 0.24
HIPK4Q8NE63 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 AL365209.1-201ENST00000624418 6473 ntBASIC16.58■□□□□ 0.24
HIPK4Q8NE63 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 AC005052.1-201ENST00000625181 2492 ntBASIC16.57■□□□□ 0.24
HIPK4Q8NE63 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 RASA4DP-201ENST00000460726 1199 ntBASIC16.57■□□□□ 0.24
HIPK4Q8NE63 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 AL136038.4-201ENST00000603606 1261 ntBASIC16.57■□□□□ 0.24
HIPK4Q8NE63 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK4Q8NE63 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 AL391807.1-203ENST00000604392 2365 ntBASIC16.56■□□□□ 0.24
HIPK4Q8NE63 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 MST1L-201ENST00000442552 2185 ntBASIC16.56■□□□□ 0.24
HIPK4Q8NE63 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms