Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 AC093909.1-201ENST00000504731 1122 ntBASIC14.9□□□□□ -0.02
CPEB3Q8NE35 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 SLC25A6P4-201ENST00000586535 553 ntBASIC14.9□□□□□ -0.02
CPEB3Q8NE35 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 AL049840.3-201ENST00000602669 611 ntBASIC14.9□□□□□ -0.02
CPEB3Q8NE35 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.9□□□□□ -0.02
CPEB3Q8NE35 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 AP002414.3-201ENST00000589352 1468 ntBASIC14.89□□□□□ -0.03
CPEB3Q8NE35 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 AC243591.1-201ENST00000452967 1364 ntBASIC14.89□□□□□ -0.03
CPEB3Q8NE35 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 AP002414.1-201ENST00000391405 1147 ntBASIC14.89□□□□□ -0.03
CPEB3Q8NE35 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 AL031284.1-201ENST00000419297 478 ntBASIC14.89□□□□□ -0.03
CPEB3Q8NE35 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 RNA5SP419-201ENST00000515908 135 ntBASIC14.89□□□□□ -0.03
CPEB3Q8NE35 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 AC105339.3-201ENST00000560043 636 ntBASIC14.89□□□□□ -0.03
CPEB3Q8NE35 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 AD000864.1-201ENST00000624076 2295 ntBASIC14.89□□□□□ -0.03
CPEB3Q8NE35 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.89□□□□□ -0.03
CPEB3Q8NE35 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms