Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 AC008608.2-201ENST00000606089 416 ntBASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 AL603756.1-201ENST00000606511 2163 ntBASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 KRT8P49-201ENST00000604166 1432 ntBASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 AL391256.1-201ENST00000443260 1855 ntBASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 AL645728.1-201ENST00000366221 2101 ntBASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 FGFR3P6-201ENST00000457012 610 ntBASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 AC139887.3-201ENST00000568585 713 ntBASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL3Q8IVW4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDKL3Q8IVW4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDKL3Q8IVW4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 SCARNA2-201ENST00000458748 420 ntBASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 SART3-203ENST00000546611 1184 ntBASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 LINC00895-201ENST00000629028 1637 ntBASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL3Q8IVW4 HLA-A-202ENST00000376806 1854 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms