Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 ALOX12P2-203ENST00000570921 1945 ntBASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 STK19B-204ENST00000512515 211 ntBASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 RNF126P1-202ENST00000569893 925 ntBASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 AC139887.4-201ENST00000607877 719 ntBASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 TUBB8P12-201ENST00000308911 1335 ntBASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 TUBB7P-202ENST00000428444 1305 ntBASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 TUBB8P7-204ENST00000567960 1332 ntBASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NUDCD3Q8IVD9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 YBX1P2-201ENST00000489612 999 ntBASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 TSPY26P-202ENST00000565928 3884 ntBASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 AC009336.1-201ENST00000608941 1553 ntBASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 HYMAI-201ENST00000635591 3347 ntBASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.93■□□□□ 0.3
NUDCD3Q8IVD9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 FAM220CP-201ENST00000395253 831 ntBASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 GUSBP12-201ENST00000513727 720 ntBASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 PAUPAR-201ENST00000630360 2965 ntBASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms