Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 AC006011.2-201ENST00000621313 1158 ntBASIC18.5■□□□□ 0.55
CNGA4Q8IV77 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 AC073592.5-201ENST00000624854 528 ntBASIC18.5■□□□□ 0.55
CNGA4Q8IV77 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNGA4Q8IV77 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 AC005521.1-201ENST00000393351 872 ntBASIC18.49■□□□□ 0.55
CNGA4Q8IV77 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 DUX4L17-201ENST00000557360 1267 ntBASIC18.49■□□□□ 0.55
CNGA4Q8IV77 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 AC011467.2-201ENST00000598425 242 ntBASIC18.49■□□□□ 0.55
CNGA4Q8IV77 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 AL021920.2-201ENST00000624828 1351 ntBASIC18.49■□□□□ 0.55
CNGA4Q8IV77 AC006538.1-201ENST00000567905 1585 ntBASIC18.49■□□□□ 0.55
CNGA4Q8IV77 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.49■□□□□ 0.55
CNGA4Q8IV77 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 ACTG1P4-201ENST00000425123 1122 ntBASIC18.48■□□□□ 0.55
CNGA4Q8IV77 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNGA4Q8IV77 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 AL365203.3-201ENST00000609742 2057 ntBASIC18.47■□□□□ 0.55
CNGA4Q8IV77 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms