Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 AC108860.2-201ENST00000562760 2183 ntBASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 TFAMP1-201ENST00000412727 736 ntBASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 SPDYE11-202ENST00000450699 704 ntBASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 RARRES2P8-201ENST00000566335 367 ntBASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 SPDYE9P-201ENST00000570642 692 ntBASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 MIR4492-201ENST00000581627 80 ntBASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 AL031055.1-201ENST00000606362 631 ntBASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 SPDYE10P-202ENST00000612005 668 ntBASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 SPDYE8P-202ENST00000612377 668 ntBASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 AC093028.1-201ENST00000622998 982 ntBASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.09■□□□□ 0.97
UBE3BQ7Z3V4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 AL023806.1-201ENST00000603994 1649 ntBASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 AC079140.1-201ENST00000508039 487 ntBASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 FAM86C2P-203ENST00000528684 1004 ntBASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 AC109635.5-201ENST00000533593 962 ntBASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 AC243562.1-201ENST00000560672 389 ntBASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 AL355385.1-201ENST00000606123 409 ntBASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.08■□□□□ 0.97
UBE3BQ7Z3V4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
UBE3BQ7Z3V4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBE3BQ7Z3V4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBE3BQ7Z3V4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBE3BQ7Z3V4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBE3BQ7Z3V4 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.08■□□□□ 0.96
UBE3BQ7Z3V4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
UBE3BQ7Z3V4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBE3BQ7Z3V4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBE3BQ7Z3V4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.08■□□□□ 0.96
UBE3BQ7Z3V4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 AC092474.2-201ENST00000424288 719 ntBASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 CYP2A7P1-201ENST00000595391 815 ntBASIC21.07■□□□□ 0.96
UBE3BQ7Z3V4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms