Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD3Q7Z3D4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 AC108751.1-201ENST00000490852 363 ntBASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD3Q7Z3D4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD3Q7Z3D4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD3Q7Z3D4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD3Q7Z3D4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD3Q7Z3D4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD3Q7Z3D4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD3Q7Z3D4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.08■□□□□ 0.33
LYSMD3Q7Z3D4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
LYSMD3Q7Z3D4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
LYSMD3Q7Z3D4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD3Q7Z3D4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD3Q7Z3D4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 AC009947.1-201ENST00000444350 727 ntBASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 SLC25A1P1-201ENST00000528351 927 ntBASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 GGTLC5P-201ENST00000617623 998 ntBASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 AC004790.2-201ENST00000623588 572 ntBASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 AL391005.1-201ENST00000623953 2435 ntBASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.08■□□□□ 0.32
LYSMD3Q7Z3D4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms