Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHFQ7M4L6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.43■□□□□ 0.06
SHFQ7M4L6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHFQ7M4L6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHFQ7M4L6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHFQ7M4L6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHFQ7M4L6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHFQ7M4L6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHFQ7M4L6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHFQ7M4L6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.43■□□□□ 0.06
SHFQ7M4L6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 NFIC-211ENST00000641145 8399 ntBASIC15.42■□□□□ 0.06
SHFQ7M4L6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 AL671277.2-201ENST00000458060 996 ntBASIC15.42■□□□□ 0.06
SHFQ7M4L6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 AC083849.1-201ENST00000615227 514 ntBASIC15.42■□□□□ 0.06
SHFQ7M4L6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SHFQ7M4L6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHFQ7M4L6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 TSPY22P-201ENST00000427496 604 ntBASIC15.41■□□□□ 0.06
SHFQ7M4L6 SPDYE13P-201ENST00000445314 798 ntBASIC15.41■□□□□ 0.06
SHFQ7M4L6 AC104076.2-201ENST00000448912 469 ntBASIC15.41■□□□□ 0.06
SHFQ7M4L6 RN7SL606P-201ENST00000472779 293 ntBASIC15.41■□□□□ 0.06
SHFQ7M4L6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 AC011840.4-201ENST00000578471 627 ntBASIC15.41■□□□□ 0.06
SHFQ7M4L6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 AC090616.6-201ENST00000582640 721 ntBASIC15.41■□□□□ 0.06
SHFQ7M4L6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 AC124864.1-201ENST00000623408 392 ntBASIC15.41■□□□□ 0.06
SHFQ7M4L6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms