Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COPS6Q7L5N1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COPS6Q7L5N1 MIR770-201ENST00000390219 98 ntBASIC21.33■■□□□ 1.01
COPS6Q7L5N1 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.33■■□□□ 1.01
COPS6Q7L5N1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.33■■□□□ 1.01
COPS6Q7L5N1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
COPS6Q7L5N1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.33■■□□□ 1.01
COPS6Q7L5N1 KRT18P32-201ENST00000424695 1287 ntBASIC21.33■■□□□ 1.01
COPS6Q7L5N1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.33■■□□□ 1.01
COPS6Q7L5N1 MIR3909-201ENST00000579518 119 ntBASIC21.33■■□□□ 1.01
COPS6Q7L5N1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.33■■□□□ 1.01
COPS6Q7L5N1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COPS6Q7L5N1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.33■■□□□ 1
COPS6Q7L5N1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COPS6Q7L5N1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
COPS6Q7L5N1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
COPS6Q7L5N1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.33■■□□□ 1
COPS6Q7L5N1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
COPS6Q7L5N1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.33■■□□□ 1
COPS6Q7L5N1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
COPS6Q7L5N1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.32■■□□□ 1
COPS6Q7L5N1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
COPS6Q7L5N1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.32■■□□□ 1
COPS6Q7L5N1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.32■■□□□ 1
COPS6Q7L5N1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.32■■□□□ 1
COPS6Q7L5N1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.32■■□□□ 1
COPS6Q7L5N1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.32■■□□□ 1
COPS6Q7L5N1 Z92544.3-201ENST00000624747 417 ntBASIC21.32■■□□□ 1
COPS6Q7L5N1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.32■■□□□ 1
COPS6Q7L5N1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.32■■□□□ 1
COPS6Q7L5N1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.32■■□□□ 1
COPS6Q7L5N1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.32■■□□□ 1
COPS6Q7L5N1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.32■■□□□ 1
COPS6Q7L5N1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 AC016027.1-202ENST00000607927 1699 ntBASIC21.31■■□□□ 1
COPS6Q7L5N1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
COPS6Q7L5N1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.31■■□□□ 1
COPS6Q7L5N1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.31■■□□□ 1
COPS6Q7L5N1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.31■■□□□ 1
COPS6Q7L5N1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.31■■□□□ 1
COPS6Q7L5N1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
COPS6Q7L5N1 IGHV3-62-201ENST00000520057 340 ntBASIC21.31■■□□□ 1
COPS6Q7L5N1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.31■■□□□ 1
COPS6Q7L5N1 LINC02084-201ENST00000606069 1096 ntBASIC21.31■■□□□ 1
COPS6Q7L5N1 AC084121.4-201ENST00000641598 221 ntBASIC21.31■■□□□ 1
COPS6Q7L5N1 AF228730.8-201ENST00000642140 221 ntBASIC21.31■■□□□ 1
COPS6Q7L5N1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.31■■□□□ 1
COPS6Q7L5N1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COPS6Q7L5N1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.31■■□□□ 1
COPS6Q7L5N1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.31■■□□□ 1
COPS6Q7L5N1 HTR7P1-202ENST00000624664 4411 ntBASIC21.31■■□□□ 1
COPS6Q7L5N1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COPS6Q7L5N1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS6Q7L5N1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPS6Q7L5N1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPS6Q7L5N1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
COPS6Q7L5N1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPS6Q7L5N1 UXT-AS1-201ENST00000590504 1525 ntBASIC21.3■■□□□ 1
COPS6Q7L5N1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COPS6Q7L5N1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
COPS6Q7L5N1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.3■■□□□ 1
COPS6Q7L5N1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.3■■□□□ 1
COPS6Q7L5N1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPS6Q7L5N1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.3■■□□□ 1
COPS6Q7L5N1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
COPS6Q7L5N1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.3■■□□□ 1
COPS6Q7L5N1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPS6Q7L5N1 RBPMS2P1-201ENST00000437762 623 ntBASIC21.3■■□□□ 1
COPS6Q7L5N1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPS6Q7L5N1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.3■■□□□ 1
COPS6Q7L5N1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.3■■□□□ 1
COPS6Q7L5N1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
COPS6Q7L5N1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
COPS6Q7L5N1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.29■■□□□ 1
COPS6Q7L5N1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms