Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 RN7SL850P-201ENST00000579959 291 ntBASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 AL645929.1-201ENST00000420084 975 ntBASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 DUX4L26-201ENST00000489078 1255 ntBASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PTCHD4Q6ZW05 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 HYMAI-201ENST00000635591 3347 ntBASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 AC132872.4-202ENST00000622924 2756 ntBASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 AC007950.2-201ENST00000615045 2347 ntBASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms