Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 AC105021.1-202ENST00000570572 669 ntBASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 SSH2-210ENST00000582084 560 ntTSL 3 BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPAQ5VT25 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 TP53TG3HP-202ENST00000569755 579 ntBASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 AC061975.2-201ENST00000581722 295 ntBASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 RPS15-212ENST00000593052 629 ntTSL 2 BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPAQ5VT25 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 RASL12-203ENST00000434605 982 ntTSL 2 BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 IGHV3-71-201ENST00000523324 359 ntBASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 AL390961.4-201ENST00000623958 2535 ntBASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPAQ5VT25 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 HILS1-202ENST00000545329 423 ntBASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 AC093724.1-201ENST00000448659 1027 ntBASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 FHL2-212ENST00000607522 759 ntTSL 2 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 AL589739.1-201ENST00000607720 493 ntBASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC25.29■■□□□ 1.64
CDC42BPAQ5VT25 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 CROCCP2-202ENST00000412962 2773 ntBASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 GIMAP3P-201ENST00000495150 836 ntBASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 AC007431.3-201ENST00000623221 587 ntBASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 SLC7A15P-201ENST00000424028 1363 ntBASIC25.28■■□□□ 1.64
CDC42BPAQ5VT25 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 ATP5G2P4-201ENST00000442175 420 ntBASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms