Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN12P56749 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CLDN12P56749 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLDN12P56749 FAM8A6P-201ENST00000407496 1135 ntBASIC14.84□□□□□ -0.03
CLDN12P56749 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.84□□□□□ -0.03
CLDN12P56749 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN12P56749 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN12P56749 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.84□□□□□ -0.03
CLDN12P56749 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.84□□□□□ -0.03
CLDN12P56749 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.84□□□□□ -0.03
CLDN12P56749 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.84□□□□□ -0.03
CLDN12P56749 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN12P56749 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN12P56749 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN12P56749 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN12P56749 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.83□□□□□ -0.03
CLDN12P56749 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.83□□□□□ -0.03
CLDN12P56749 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN12P56749 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CLDN12P56749 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CLDN12P56749 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN12P56749 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN12P56749 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CLDN12P56749 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
CLDN12P56749 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 AC005052.1-201ENST00000625181 2492 ntBASIC14.83□□□□□ -0.04
CLDN12P56749 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CLDN12P56749 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CLDN12P56749 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN12P56749 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.83□□□□□ -0.04
CLDN12P56749 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CLDN12P56749 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN12P56749 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN12P56749 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN12P56749 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CLDN12P56749 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN12P56749 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLDN12P56749 DBET-201ENST00000630918 3363 ntBASIC14.82□□□□□ -0.04
CLDN12P56749 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CLDN12P56749 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 SLC25A3P1-201ENST00000443844 931 ntBASIC14.82□□□□□ -0.04
CLDN12P56749 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN12P56749 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDN12P56749 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms