Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PER3P56645 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 AL096828.2-201ENST00000567259 1965 ntBASIC15.8■□□□□ 0.12
PER3P56645 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
PER3P56645 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.8■□□□□ 0.12
PER3P56645 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PER3P56645 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PER3P56645 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PER3P56645 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.8■□□□□ 0.12
PER3P56645 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 CNN2P11-201ENST00000429351 262 ntBASIC15.8■□□□□ 0.12
PER3P56645 BX005266.1-201ENST00000473402 457 ntBASIC15.8■□□□□ 0.12
PER3P56645 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.8■□□□□ 0.12
PER3P56645 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.8■□□□□ 0.12
PER3P56645 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.8■□□□□ 0.12
PER3P56645 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.8■□□□□ 0.12
PER3P56645 C20orf181-201ENST00000623918 480 ntBASIC15.8■□□□□ 0.12
PER3P56645 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.8■□□□□ 0.12
PER3P56645 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.8■□□□□ 0.12
PER3P56645 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PER3P56645 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.79■□□□□ 0.12
PER3P56645 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.79■□□□□ 0.12
PER3P56645 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.79■□□□□ 0.12
PER3P56645 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.79■□□□□ 0.12
PER3P56645 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.79■□□□□ 0.12
PER3P56645 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.79■□□□□ 0.12
PER3P56645 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.79■□□□□ 0.12
PER3P56645 KRT18P27-201ENST00000427733 1299 ntBASIC15.79■□□□□ 0.12
PER3P56645 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.79■□□□□ 0.12
PER3P56645 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.79■□□□□ 0.12
PER3P56645 MKNK2P1-201ENST00000437526 628 ntBASIC15.79■□□□□ 0.12
PER3P56645 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.79■□□□□ 0.12
PER3P56645 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.79■□□□□ 0.12
PER3P56645 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PER3P56645 AC116407.2-201ENST00000613639 860 ntBASIC15.79■□□□□ 0.12
PER3P56645 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.79■□□□□ 0.12
PER3P56645 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PER3P56645 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.79■□□□□ 0.12
PER3P56645 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.79■□□□□ 0.12
PER3P56645 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.79■□□□□ 0.12
PER3P56645 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PER3P56645 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.79■□□□□ 0.12
PER3P56645 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
PER3P56645 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms